Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942954.1_cds_XP_016486282.1_77132
CDS Infomation

[gene=LOC107806607] [db_xref=GeneID:107806607] [protein=ATP-dependent RNA helicase-like protein DB10 isoform X2] [protein_id=XP_016486282.1] [location=complement(join(9746..10208,10292..10610,10716..10771,11376..11653,11846..12196,12839..13108,13617..13685,14640..14762,15117..15440))] [gbkey=CDS]
Sequence

ATGGCTGCTACTGCAACTGCATCTTCTGCTGGTCCGCGTTACGCACCAGAGGACCCCACC
CTCCCAAAACCTTGGAAAGGCCTGGTTGATGGTAAGACTGGATATCTCTATTTTTGGAAT
CCAGAGACCAATGTTACCCAATATGAGAGGCCTGTTGCTCCTTCCCATGGGGGTACTGCT
CCACAACATAAATCATCGGTATCTGTAAGTTCATCAGTTCAAAGGCCTTCTCAAGGTCAA
CATCCTGACCGTGATGATGACAATGAATACAACAGAGGTAGCAATGGTTGCTTGAGCAAG
CTTTCTTCTGGTGAGGATATTCAGACTGCAAGAGGAAGTGAGCTTTCCCGCGATGAAACA
TCTGTACCTAAAAGCTATAGTGCTCCAGCTGCTGCAAGTAACATATCTCCAGACGCCTAT
CGGCGTCAGCATGAAATTTCTGTTACAGGAGGTGACGTGCCCCCACCTTTCACATCATTT
GAAGCGACTGGGTTTCCTTCGGAGCTTTTGAGGGAGATACATCAAGCTGGGTTTCCTGCT
CCTTCCCCGATACAGGCACAGTCCTGGCCCATTGCACTTCAGGGCCGCGACATAGTAGCT
GTTGCAAAGACTGGATCTGGGAAAACTTTGGGTTTCTTGCTTCCTGGCTTTATTCATCTA
AAACGACGTCGCAATAATCCTCAATCAGGCCCTACTATTTTGGTTCTGTCGCCTACAAGA
GAGTTAGCTACACAGATACAAGACGAAGCTGTGAAGTTTGGTAGATCGTCAAAGATATCT
TGCACGTGTCTATATGGAGGCGCCCCAAAAGGCCCTCAGCTACGAGATCTGGATAGGGGA
GTAGATATTGTTGTCGCTACCCCTGGTCGTTTGAATGATATTTTGGAGATGAGAAGAATT
AGGCTGGATCAAATTTCTTACTTGGTGTTAGATGAAGCGGATCGTATGCTGGACATGGGA
TTTGAACCTCAGATAAGGAAGATTGTGAAAGAGGTGCCGACACGACGGCAGACACTGATG
TTCACAGCGACATGGCCAAAGGAGGTCCGTAAAATTGCAGCTGATCTATTGGTTAATCCA
GTTCAGGTTAACATTGGGAATGTTGATGAACTTGTTGCAAACAAGTCTATAACACAGTAC
GTTGAAGTCTTGTCATATATGGAGAAACAAAGGCGGCTAGACCAGATCTTGAGATCCCAA
GAACCAGGATCAAAAATCATCATCTTCTGTGCAACAAAGAAAATGTGTGACCAACTTGCT
CGCAATCTTACACGCCCATTTGGAGCTGCTGCAATTCATGGTGATAAATCTCAGGGTGAG
AGGGATCATGTATTGAGCCAGTTCCGCACGGGTAGATCCCCCGTTCTTGTCGCCACAGAT
GTTGCTGCCCGGGGCTTGGATGTCAAAGATATCAGGGTGGTGATCAACTTTGACTTTCCT
ACTGGAGTAGAGGATTATGTTCACAGAATAGGAAGAACCGGTCGGGCTGGTGCGACTGGT
GAGGCCTACACATTTTTTTGTGACCAGGATGCTAAGCATGCTTCAGATCTTATTAAAATT
TTAGAAGGAGCAAATCAGCAAGTGCCTACTGAACTACGTGACATGGCTTCTCGAGGTGGT
GGTATGGGAGGGGCTAGGCGTCAATGGGGTTCTGGCCCAGGCGGACGTGAAGGAGGACGT
GGGGGACGTTATGATTCCGGCTATGGTGGACGAGATGGAGGAAGGGGTGGTTGGGGAGCC
CCATCATCGGAAAGAAGTGGACGTGGTTATGACTCGGATTCACGTGACAGTGATAGATAT
GGTCATGGATCTCGTGATACCGATGCTCCACCGAGCTTCCACGCTCGTAGCTTCCATGAA
ACTATGATGCAGGCTCAACAGAGACGTGGTCGAAGTCGGAGCAGAAGCCCAAATAAAGGT
TCAGGATGGGGTGATACAAAAAGCAGGGAACGCAGTCGCAGCCGTAGTGCTGAAAGATTT
GATCAGGCTCCTCCTCGTCAAACCCCAGTTGGACGCAGTTTTCATGAAAGCATGATGGGG
CGCAGTGGATCATCCCCAGTGGCCTCAAAACACCAATCACCCTCTTACTCTGATAAACGA
TCTCCATCAGCTGGTGATTGCCAAAAGGGCTGGGAAAAAGAAAAATCTCCACCTAGATGG
CAAGGTGATGGGAAATTTGGCAATGGACCTCGTGCTTACAATGGGGAGGAGGAAGAAGGT
ATGATTCCTGAAGACGTCGAAACGAGGGCCTAA

Peptide Sequence

PEP ID

XP_016486282.1
PEP Infomation

PREDICTED: ATP-dependent RNA helicase-like protein DB10 isoform X2 [Nicotiana tabacum]
Sequence

MAATATASSAGPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPVAPSHGGTA
PQHKSSVSVSSSVQRPSQGQHPDRDDDNEYNRGSNGCLSKLSSGEDIQTARGSELSRDET
SVPKSYSAPAAASNISPDAYRRQHEISVTGGDVPPPFTSFEATGFPSELLREIHQAGFPA
PSPIQAQSWPIALQGRDIVAVAKTGSGKTLGFLLPGFIHLKRRRNNPQSGPTILVLSPTR
ELATQIQDEAVKFGRSSKISCTCLYGGAPKGPQLRDLDRGVDIVVATPGRLNDILEMRRI
RLDQISYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMFTATWPKEVRKIAADLLVNP
VQVNIGNVDELVANKSITQYVEVLSYMEKQRRLDQILRSQEPGSKIIIFCATKKMCDQLA
RNLTRPFGAAAIHGDKSQGERDHVLSQFRTGRSPVLVATDVAARGLDVKDIRVVINFDFP
TGVEDYVHRIGRTGRAGATGEAYTFFCDQDAKHASDLIKILEGANQQVPTELRDMASRGG
GMGGARRQWGSGPGGREGGRGGRYDSGYGGRDGGRGGWGAPSSERSGRGYDSDSRDSDRY
GHGSRDTDAPPSFHARSFHETMMQAQQRRGRSRSRSPNKGSGWGDTKSRERSRSRSAERF
DQAPPRQTPVGRSFHESMMGRSGSSPVASKHQSPSYSDKRSPSAGDCQKGWEKEKSPPRW
QGDGKFGNGPRAYNGEEEEGMIPEDVETRA

Transcript Sequence

Gene sequence data has not been registered.